Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852376.1_cds_XP_016511847.1_24545
CDS Infomation

[gene=LOC107828960] [db_xref=GeneID:107828960] [protein=RING-H2 finger protein ATL13-like] [protein_id=XP_016511847.1] [location=44324..45835] [gbkey=CDS]
Sequence

ATGAGTTGGGTTTTTATTAAAATTCAAGAAAGTAGTGTTCTTTCTCCATCAAATCAACCA
CTTTTCCTCCTTCAACCACCACCACCACTCCCCTTAACACCATTTTCTACACATGATTCT
AGTGGTAGTAATGGTGGTCTTTTCAATTTGAATAACAAAGTAAGTCCAAGTATACTTCTT
GTTATCATAATTCTTGCAATTATCTTCTTCATTTCTGGTTTACTTCACTTACTTGTTAGA
TTCTTATTAAGGCCAACAAATAGAGATCCAGATGAATTAGACAATGTAACAGCACTTCAA
GGTCAATTACAACAACTTTTTCACTTACATGATTCTGGTGTTGATCAATCTTTTATTGAT
ACACTACCTGTATTCAATTACAAATCAATTATTGGTGTAAAAGATCCTTTTGATTGTGCT
GTTTGTTTGTGTGAATTTGAGCCAGAAGATAAGCTTAGATTGCTCCCTAAATGTAGCCAT
GCTTTTCATATGGAGTGTATTGACACTTGGCTTTTGTCTCATTCAACTTGTCCTCTTTGT
AGAGCTAGTTTATTGCCTGATTTCTCTTCATCAAATAACAACCATACTTGTTCTCCTATT
GTCTTTGTTCTTGAATCTGGTAGTGAAAGTTCAAGGGAAAATATTGTTCAAAATAGTCAT
GAATTTGGATCATTGAGAAGAAATAATTCAATTTCAAGACTAAGTTTAAGTTCCCATTTT
GAGGAAATTAATGTCCAAGATGTTGTTGTGGCAAAAACTTGTGATGAAATTCAAGGAAAA
GTTGAGGAAGTTGAAAAAGTTGTACAAGTGAAGTTAGGAAAATTCAAGAATGTAGAGCCA
CAAGAAAGTGAAGAAGGAAGTAGTAATAATATTGATTCAAGAAGATGTTTTTCAATGGGA
TCATTTGCTTATGTATTAGATGAAACTACATCTTTACATGTTCCAATTAGAAAAACACCA
ACAAAAAAGAGTTCAAACATGAAGCCAAATATGCCACCTTTGACACCAGGTCATAGACAA
GCAATGTCTGAATGTGGTTGTGATTCAAGAAGAGAATTCAATGGATTTGAGGGATTCAAA
TTTGCTGAAAATTCCATGCAAAACAACATTAATGTCAATGAAAACAAGATTCTTGAAAAT
GGGAGTTGTAAAAGAGAGAGCTTTTCAGTTTCCAAGATTTGGTTAAGGGGAAAAAAGGAT
GAAAATAATAATTCAAGAAGGGCTTTTTCTTTTCGGTTTCCGGTTAGCCGAAATATTCCA
GCCGCGGCGGTTTCAGGCGGCTCCGTCGCGGCTAAGAATAGTGGTGGTGGTGATGGTGGT
GGTAGTAGGAGGACTATTTCAGAGATTGATATTGGTACATGGGAAAAAAATGGAGGATGT
GATGAAGAAAATCAATGCTACAATAGATTGGAATTTCAACCAAAAACACCATCTTTTGCA
AGGAGAACTCTTCTTTGGCTTATGGGAAAACAAAACAAAGTTGTACACTCTTCTTTCTCA
TCAAATCTCTAG

Peptide Sequence

PEP ID

XP_016511847.1
PEP Infomation

PREDICTED: RING-H2 finger protein ATL13-like [Nicotiana tabacum]
Sequence

MSWVFIKIQESSVLSPSNQPLFLLQPPPPLPLTPFSTHDSSGSNGGLFNLNNKVSPSILL
VIIILAIIFFISGLLHLLVRFLLRPTNRDPDELDNVTALQGQLQQLFHLHDSGVDQSFID
TLPVFNYKSIIGVKDPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLC
RASLLPDFSSSNNNHTCSPIVFVLESGSESSRENIVQNSHEFGSLRRNNSISRLSLSSHF
EEINVQDVVVAKTCDEIQGKVEEVEKVVQVKLGKFKNVEPQESEEGSSNNIDSRRCFSMG
SFAYVLDETTSLHVPIRKTPTKKSSNMKPNMPPLTPGHRQAMSECGCDSRREFNGFEGFK
FAENSMQNNINVNENKILENGSCKRESFSVSKIWLRGKKDENNNSRRAFSFRFPVSRNIP
AAAVSGGSVAAKNSGGGDGGGSRRTISEIDIGTWEKNGGCDEENQCYNRLEFQPKTPSFA
RRTLLWLMGKQNKVVHSSFSSNL

Transcript Sequence

Gene sequence data has not been registered.